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F. Y. B. Sc. Syllabus for MICROBIOLOGY

(2008-09 Onwards)

GENERAL GUIDELINES FOR THE SYLLABUS:

1.      There are two theory papers of 60 marks each

2.      There are 2 practicals based on theory papers of 40 marks each

3.      Paper 1 contains 6 UNITS and Paper 2 contains 6 UNITS

4.      Unit 1, 2 & 3 are to be covered in the FIRST TERM

5.      Unit 4, 5 & 6 are to be covered in the SECOND TERM

 

PAPER 1 - FUNDAMENTALS OF MICROBIOLOGY                                                 90 lectures

UNIT I- INTRODUCTION TO MICROBIOLOGY AND PROCARYOTIC CELL STRUCTURE AND FUNCTION                                                                                                                 15 lectures

 

1.1 History and scope of Microbiology                                                                                                2 lectures

1.2 Procaryotic cell membranes- Plasma membrane and internal systems                            2 lectures

1.3 Cytoplamic Matrix- Inclusion bodies, ribosome.                                                                   2 lectures

1.4 Bacterial chromosome and plasmids- source of information                                        2 lectures

1.5 Cell Wall                                                                                                                                     2 lectures

1.6 Components external to cell wall- Capsule, slime layer S layer, pili, fimbriae,

       and flagella.                                                                                                                                  3 lectures

1.7 Bacterial endospores and their formation                                                                         2 lectures

 

UNIT II- EUCARYOTIC CELL STRUCTURE AND FUNCTION                                     15 lectures

2.1 Overview of eukaryotic cell structure and function                                                               1 lecture

2.2 The cytoplasmic matrix, microfilaments, intermediate filaments and microtubules       2 lectures

2.3 Endoplasmic reticulum and golgi apparatus                                                                                1 lecture

2.4 Lysosomes and endocytosis                                                                                                    2 lectures

2.5 Eucaryotic ribosomes, mitochondria and chloroplasts                                                   2lectures

2.6 Nucleus, nucleolus, cell division, mitosis and meiosis                                                           4 lectures

2.7 External cell coverings                                                                                                                        2 lectures

2.8 Comparison between prokaryotic and eukaryotic cell                                                      1 lecture

 

UNIT III- MICROBIAL NUTRITION, CULTIVATION, ISOLATION AND

               PRESERVATION                                                                                                 15 lectures

3.1 Nutritional requirements- Carbon, Oxygen, Hydrogen, Nitrogen, Phosphorus,

                                                Sulphur and Growth factors                                                           2 lectures

3.2 Nutritional types of microorganisms                                                                                           2 lectures

3.3 Nutrient uptake mechanisms                                                                                                   3 lectures

3.4 Types of culture media with examples                                                                             3 lectures

3.5 Isolation of microorganisms and pure culture techniques                                                3 lectures

3.6 Preservation of microorganisms                                                                                           2 lectures

 

UNIT IV- MICROBIAL GROWTH                                                                                       15 lectures

4.1 Definition of growth, Mathematical expression, Growth curve                                     3 lectures

4.2 Measurement of Growth                                                                                                       6 lectures

      a) Direct Microscopic count- Breed’s, Petroff-Hausser counting chamber,

          Haemocytometer

      b) Viable count- Spread plate and Pour plate technique

      c) Measurement of cell mass

      d) Turbidity measurements- Nephelometer and spectrophotometer techniques

      e) Measurements of cell constituents.

4.3 Synchronous growth, Continuous growth (chemostat and turbidostat)                            2 lectures

4.4 Growth Yield                                                                                                                           1 lecture

4.5 Influence of environmental factors on growth                                                                        1 lecture

4.6 Microbial growth in natural environment                                                                           1 lecture

4.7 Counting viable non-culturable organisms-Quorum sensing techniques                              1 lecture

UNIT V- STUDY OF YEAST, MOLDS, ALGAE AND PROTOZOANS.                            15 lectures

5.1 Classification, Morphological characteristics, Cultivation, Reproduction and

       Significance

a) Yeast and Molds                                                                                                   7 lectures

b)      Algae                                                                                                            4 lectures

c)     Protozoans                                                                                                          4 lectures

 

UNIT VI- STUDY OF VIRUSES, RICKETTSIA, CHLAMYDIA, ACTINOMYCETES AND

               ARCHAEBACTERIA                                                                                                       15 lectures

6.1 Viruses: Classification of viruses, General characteristics, Structure of T4 phage,

                      Viral cultivation, inclusion bodies and their significance, life cycle of

                      Coliphages, Lytic cycle and Lysogeny                                                             6 lectures

6.2 Rickettsia: General characteristics, Diseases and vectors                                                     2 lectures

6.3 Chlamydia: General characteristics                                                                                              1 lecture

6.4 Actinomycetes: General properties, cell wall types, whole cell sugar patterns,

                                Characteristics as per new classification and significance               3 lectures

6.5 Archaea: Characteristics of major archaeal groups                                                             3 lectures

 

                             PAPER 2- APPLIED MICROBIOLOGY                           90 lectures

UNIT I- MICROSCOPY                                                                                                                   15 lectures

1.1 Concepts                                                                                                                                      1 lecture

1.2 Lens and bending of Light                                                                                                   2 lectures

1.3 The Light Microscope                                                                                                               6 lectures

      a) Bright field microscope

      b) Resolution of the microscope

1.4 The Electron Microscope                                                                                                   4 lectures

       a) The Transmission Electron Microscope

       b) The Scanning Electron Microscope

1.5 Newer Techniques in Microscopy                                                                                       2 lectures

       a) Confocal Microscopy

       b) Scanning Probe Microscopy

            eg: The Scanning Tunneling Microscope

                  The Atomic Force Microscope

UNIT II- CONTRAST ENHANCEMENT TECHNIQUES                                                       15 lectures

2.1 The Dark Field Microscope                                                                                                   1 lecture

2.2 The Phase Contrast Microscope                                                                                       1 lecture

2.3 The Differential Interference Contrast Microscope                                                               1 lecture

2.4 The Fluorescence Microscope                                                                                                   1 lecture

2.5 Staining of Specimens                                                                                                             8 lectures

       a) Fixation

       b) Dyes and simple staining

       c) Differential staining

       d) Staining specific structures

2.6 Specimen preparation in TEM                                                                                                    3 lectures

       Staining, shadowing with metals, Freeze etching.

 

UNIT III- CONTRAL OF MICROORGANISMS                                                                  15 lectures

3.1 Definitions of Frequently used terms                                                                                          1 lecture

3.2 Pattern/Rate of Microbial Death                                                                                      1 lecture

3.3 Conditions Influencing the effectiveness of Antimicrobial agents                                     1 lecture

3.4 Physical Methods of Microbial Control                                                                                   5 lectures

       a) Heat: Moist and Dry                              b) Low temperature

       c) Filtration                                            d) High pressure

       e) Desiccation                                        f) Osmotic pressure

       g) Radiations

3.5 Chemical methods of Microbial Control                                                                                   5 lectures

       a) Phenolics                                           b) Biguanides-Chlorhexidine

       c) Alcohols                                             d) Halogens

       e) Heavy Metals                                    f) Quaternary ammonium compounds

       g) Surface active agents             h) Aldehydes

       i) Sterilizing gases                           j)Peroxygens

       k) Chemotherapeutic agents

3.6 Evaluation of effectiveness of Antimicrobial agent                                                               1 lecture

 

UNIT IV- MICROORGANISMS IN AIR AND SOIL                                                            15 lectures

4.1 Air Microbiology                                                                                                                        2 lectures

       a) Types and Significance of organisms

       b) Techniques of Studying Air Microflora

4.2 Microorganisms in Terrestrial Environments                                                                         4 lectures

       a) Soil as an environment

       b) Soils, plants and nutrients

       c) Diversity of soil microorganisms

       d) Formation of different soils

4.3 Biogeochemical cycling                                                                                                      5 lectures

       a) Carbon cycle                                    b) Nitrogen cycle

       c) Phosphorus cycle                             d) Sulphur cycle

       e) Iron cycle                                          f) Manganese cycle

       g) Metal toxicity

4.4 The Physical Environment                                                                                                  2 lectures

       a) The Microenvironment and Niche

       b)  Biofilms and Microbial mats

       c) Microorganisms and ecosystems

4.5 Examination of Microbial Populations                                                                            2 lectures

       a) Examination Techniques

       b) Examination of community structure

       c) Microbial activity and turnover

       d) Recovery or Addition of individual microbes

 

UNIT V- MICROORGANISMS IN WATER AND IN WASTEWATER                            15 lectures

5.1 Marine and Fresh water environments

      a) Water as a microbial habitat

      b) Nutrient cycling                                                                                                                        1 lecture

      c) Fresh water environments                                                                                                 2 lectures

                Glaciers and permanently frozen lakes

                Streams and rivers

                Lakes

d)     Marine environments                                                                                     2 lectures

Estuaries and Salts marshes

The Photic zone

             The Benthic zone

      e) Water Purification and Sanitary Analysis                                                                                  6 lectures

5.2 Waste water Microbiology                                                                                                            4 lectures

        a) Measurement of waste water quality

        b) Waste water Treatment

UNIT VI- MICROBIAL INTERACTIONS                                                                            15 lectures

6.1 Types of Microbial Interactions                                                                                        2 lectures

       Mutualism, Cooperation, Commensalisms, Predation

       Parasitism, Amensalism, Competition

6.2 Human Microbe Interactions                                                                                                    8 lectures

       a) Normal Flora of the Human body:

                     Skin, Nose and nasopharynx, Oropharynx, Respiratory tract,

                     Eye, External ear, Mouth, Stomach, Small Intestine, Large intestine,

                      Genitourinary tract.

       b) Relationship between microbiota and the host

       c) Gnotobiotic animals

6.3 Microbial association with vascular plants                                                                          5 lectures

       a) Phyllosphere

       b) Rhizosphere and rhizoplane

       c) Mycorrhizae

       d) Nitrogen fixation: Rhizobia, Actinorhizae, Stem nodulating rhizobia

       e) Fungal and bacterial endophytes

       f) Agrobacterium and other plant pathogens.

                    ----------x----------x----------x----------x----------x----------x----------

                              LIST OF BOOKS FOR PAPER 1 AND PAPER 2

1.      Prescott, Harley, Klein- Microbiology 5th and 6th International edition 2002 & 2006

MacGraw Hill.

2.      Kathleen Park Talaro and Arthur Talaro- Fondationsin Mcrobiology 4th International edition 2002, MacGraw Hill.

3.      Michael.T.Madigan, John.M.Martinto- Brock Biology of Microorganisms 11th edition international edition 2006 Pearson Prentice Hall

4.      A.J.Salle- fundamental Principles of Bacteriology.

5.      Stanier, Ingraham et al, General Microbiology- 4th and 5th edition 1987, Macmillan education limited.

***************

  PRACTICAL 1

1.      Safety in laboratory

2.      Procaryotic and Eucaryotic cell structure

a)      Monochrome Staining

b)     Negative staining

c)     Differential staining: Gram’s staining

d)     Staining of specific structures of bacteria:

 Cell-wall, capsule, endospores, metachromatic granules, lipid granules, flagella,       spirochaeta staining.

e)     Permanent slides of Cyanobacteria ( Anabena, Nostoc, Rivularia, Oscillatoria)

f)      Permanent slides of Protozoa ( Amoeba and Paramoecium)

3.      Preparation of culture medium:

a)      Liquid medium (Nutrient broth)

b)     Solid media (Nutrient agar, Sabouraud agar)

c)     Preparation of slants, butts and plates

4.      Inoculation Techniques:

a)      Liquid medium

b)     Solid media (slants, butts and plates)

c)     Study of Colony Characteristics

d)     Study of Motility (Hanging drop preparation)

e)     Use of differential, selective and enriched media

                                                    (i)MacConkey’s agar

                                                    (ii)Superimposed blood agar

5.      Determination of optimum growth conditions (Temperature, pH)

6.      Cultivation of yeasts and molds:

a)      Cultivation on Sabouraud agar

b)     Static and Shaker cultures

c)     Fungal wet mounts and study of morphological characteristics

                     (i)Mucor

                     (ii)Rhizopus

                    (iii)Aspergillus

                    (iv)Penicillium

d)     Slide-Culture Technique

7.      Measurement of Microbial growth

a)      Microscopic cell count (Haemocytometer)

b)     Preparation of opacity tubes and determination of cell count.

c)     Viable count (Pour plate and surface spread)

d)     Growth curve of E.coli and determination of generation type (Grp.Expt)

8.      Micrometry: Measurements of cell dimensions (Yeast)

9.      Assignment: Contribution of a scientist in the field of Microbiology.

          PRACTICAL 2

1.      Compound Microscope

2.      Physical methods of control of microorganisms:

a)      Heat: Autoclaving, Fractional sterilization, Dry heat.

b)     Bacteria proof filtration (Demonstration of Membrane filtration)

c)     Effect of U-V rays

d)     Effect of desiccation.

e)     Effect of high osmotic pressure

3.      Chemical Methods of Control of microorganisms:

a)      Effect of phenolics (Disc Method)

b)     Oligodynamic action

c)     Tween 80

d)     Dyes (Disc Method)